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EMNLP Findings2024

SeRTS: Self-Rewarding Tree Search for Biomedical Retrieval-Augmented Generation

Minda Hu, Licheng Zong, Hongru Wang, Jingyan Zhou, Jingjing Li, Yichen Gao, Kam-Fai Wong, Yu Li, Irwin King

Abstract

Large Language Models (LLMs) have shown great potential in the biomedical domain with the advancement of retrieval-augmented generation (RAG). However, existing retrievalaugmented approaches face challenges in addressing diverse queries and documents, particularly for medical knowledge queries, resulting in sub-optimal performance. To address these limitations, we propose a novel plugand-play LLM-based retrieval method called Self-Rewarding Tree Search (SeRTS) based on Monte Carlo Tree Search (MCTS) and a selfrewarding paradigm. By combining the reasoning capabilities of LLMs with the effectiveness of tree search, SeRTS boosts the zero-shot performance of retrieving high-quality and informative results for RAG. We further enhance retrieval performance by fine-tuning LLMs with Proximal Policy Optimization (PPO) objectives using the trajectories collected by SeRTS as feedback. Controlled experiments using the BioASQ-QA dataset with GPT-3.5-Turbo and LLama2-7b demonstrate that our method significantly improves the performance of the BM25 retriever and surpasses the strong baseline of self-reflection in both efficiency and scalability. Moreover, SeRTS generates higher-quality feedback for PPO training than self-reflection. Our proposed method effectively adapts LLMs to document retrieval tasks, enhancing their ability to retrieve highly relevant documents for RAG in the context of medical knowledge queries. This work presents a significant step forward in leveraging LLMs for accurate and comprehensive biomedical question answering.

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Cited by top-tier papers5

  1. RARE: Retrieval-Augmented Reasoning Enhancement for Large Language ModelsHieu Tran, Zonghai Yao, Zhichao Yang, Junda Wang et al.ACL 2025 · 27 citations
  2. Search-R2: Enhancing Search-Integrated Reasoning via Actor-Refiner CollaborationBowei He, Minda Hu, Zenan Xu, Hongru WANG et al.ICML 2026 · 9 citations
  3. RaDeR: Reasoning-aware Dense Retrieval ModelsDebrup Das, Seán Ó Nualláin, Razieh RahimiEMNLP 2025 · 1 citation
  4. PerFit: Exploring Personalization Shifts in Representation Space of LLMsJiahong Liu, Wenhao Yu, Quanyu Dai, Zhongyang Li et al.ICLR 2026
  5. Towards Omni-RAG: Comprehensive Retrieval-Augmented Generation for Large Language Models in Medical ApplicationsZhe Chen, Yusheng Liao, Shuyang Jiang, Pingjie Wang et al.ACL 2025

Builds on13

  1. LoRA: Low-Rank Adaptation of Large Language ModelsEdward J. Hu, Yelong Shen, Phillip Wallis, Zeyuan Allen-Zhu et al.ICLR 2022 · 18,833 citations
  2. Reflexion: language agents with verbal reinforcement learningNoah Shinn, Federico Cassano, Ashwin Gopinath, Karthik Narasimhan et al.NeurIPS 2023 · 5,828 citations
  3. STaR: Bootstrapping Reasoning With ReasoningEric Zelikman, Yuhuai Wu, Jesse Mu, Noah D. GoodmanNeurIPS 2022 · 1,126 citations
  4. ReST-MCTS*: LLM Self-Training via Process Reward Guided Tree SearchDan Zhang, Sining Zhoubian, Ziniu Hu, Yisong Yue et al.NeurIPS 2024 · 527 citations
  5. Language Agent Tree Search Unifies Reasoning, Acting, and Planning in Language ModelsAndy Zhou, Kai Yan, Michal Shlapentokh-Rothman, Haohan Wang et al.ICML 2024 · 443 citations

Related papers

  1. Med-VRAgent: A Framework for Medical Visual Reasoning-Enhanced AgentsGuangfu Guo, Xiaoqian Lu, Yue FengEMNLP 2025
  2. Benchmarking Retrieval-Augmented Generation for MedicineGuangzhi Xiong, Qiao Jin, Zhiyong Lu, Aidong ZhangACL Findings 2024 · 312 citations
  3. MCTS-RAG: Enhancing Retrieval-Augmented Generation with Monte Carlo Tree SearchYunhai Hu, Yilun Zhao, Chen Zhao, Arman CohanEMNLP Findings 2025 · 5 citations
  4. From Conflict to Consensus: Boosting Medical Reasoning via Multi-Round Agentic RAGWenhao Wu, Zhentao Tang, Yafu Li, Shixiong Kai et al.ICML 2026
  5. Augmenting Black-box LLMs with Medical Textbooks for Biomedical Question AnsweringYubo Wang, Xueguang Ma, Wenhu ChenEMNLP Findings 2024 · 42 citations
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