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EMNLP Findings2020

MedICaT: A Dataset of Medical Images, Captions, and Textual References

Sanjay Subramanian, Lucy Lu Wang, Ben Bogin, Sachin Mehta, Madeleine van Zuylen, Sravanthi Parasa, Sameer Singh, Matt Gardner, Hannaneh Hajishirzi

Abstract

Understanding the relationship between figures and text is key to scientific document understanding. Medical figures in particular are quite complex, often consisting of several subfigures (75% of figures in our dataset), with detailed text describing their content. Previous work studying figures in scientific papers focused on classifying figure content rather than understanding how images relate to the text. To address challenges in figure retrieval and figure -to-text alignment, we introduce MED-ICAT, a dataset of medical images in context. MEDICAT consists of 217K images from 131K open access biomedical papers, and includes captions, inline references for 74% of figures, and manually annotated subfigures and subcaptions for a subset of figures. Using MEDICAT, we introduce the task of subfigure to subcaption alignment in compound figures and demonstrate the utility of inline references in image-text matching. Our data and code can be accessed at https://github.com/allenai/medicat.

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Cited by top-tier papers8

  1. PathAsst: A Generative Foundation AI Assistant towards Artificial General Intelligence of PathologyYuxuan Sun, Chenglu Zhu, Sunyi Zheng, Kai Zhang et al.AAAI 2024 · 92 citations
  2. Align, Reason and Learn: Enhancing Medical Vision-and-Language Pre-training with KnowledgeZhihong Chen, Guanbin Li, Xiang WanACM MM 2022 · 82 citations
  3. Towards Unifying Medical Vision-and-Language Pre-training via Soft PromptsZhihong Chen, Shizhe Diao, Benyou Wang, Guanbin Li et al.ICCV 2023 · 50 citations
  4. A Comprehensive Survey of Scientific Large Language Models and Their Applications in Scientific DiscoveryYu Zhang, Xiusi Chen, Bowen Jin, Sheng Wang et al.EMNLP 2024 · 28 citations
  5. MedM2G: Unifying Medical Multi-Modal Generation via Cross-Guided Diffusion with Visual InvariantChenlu Zhan, Yu Lin, Gaoang Wang, Hongwei Wang et al.CVPR 2024 · 20 citations

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