Diffusion-based Graph-agnostic Clustering
Kun Xie, Renchi Yang, Sibo Wang
Abstract
Clustering over a graph seeks to partition the nodes therein into disjoint groups such that nodes within the same cluster are tightlyknit, while those across clusters are distant from each other. In practice, graphs are often attended with rich attributes, which are termed attributed graphs. By leveraging the complementary nature of graph topology and node attributes in such graphs, graph neural networks (GNNs) have obtained encouraging performance in graph clustering. However, existing GNN-based approaches strongly rely on the homophilic assumption of the input graph, and thus, largely fail on heterophilic graphs and others embodying numerous missing or noisy links, which are widely present in real life. To bridge this gap, this paper presents DGAC, an effective graphagnostic solution for graph clustering. Particularly, DGAC overcomes the limitations of prior works by exploiting the high-order connectivity of nodes within not only the input graph G but also the affinity graph H underlying the attribute data. To achieve this goal, we first unify the embedding and clustering generations into a coherent framework optimizing the Dirichlet Energy on both G and H . Based thereon, theoretically-grounded solvers are developed for efficient constructions of the embeddings and clusters via graph diffusion operations, which aggregate features from specific neighbors, enabling the capture of high-order semantics from G or H . On top of that, DGAC includes three training loss functions that facilitate effective feature extraction and clustering. Extensive experiments, comparing DGAC against 12 baselines over 12 homophilic or heterophilic graph datasets, showcase that DGAC consistently and considerably outperforms all competitors in terms of clustering quality measured against ground truth labels. CCS Concepts • Information systems → Clustering.
Ask about this paper
Your agent reads all of it.
Lune indexed this paper to the last equation, along with the top-tier papers that cite it. Ask a question and the answer quotes them.
Your agent calls
Luneget_paper_fulltext
Free to start. No credit card required.
Terminal
Install the CLIlune papers fulltext 3071959f-ee73-4e4d-a76e-ee449de443deCited by top-tier papers3
- Effective Clustering for Large Multi-Relational GraphsXiaoyang Lin, Runhao Jiang, Renchi YangSIGMOD 2026 · 1 citation
- PoinnCARE: Hyperbolic Multi-Modal Learning for Enzyme ClassificationKun Xie, Peng Zhou, Xingyi Zhang, Wei Liu et al.ICLR 2026
- Rethinking Message Passing Neural Networks with Diffusion Distance-guided Stress MajorizationHaoran Zheng, Renchi Yang, Yubo Zhou, Jianliang XuKDD 2026
Builds on33
- Graph Contrastive Learning with AugmentationsYuning You, Tianlong Chen, Yongduo Sui, Ting Chen et al.NeurIPS 2020 · 3,042 citations
- Simple and Deep Graph Convolutional NetworksMing Chen, Zhewei Wei, Zengfeng Huang, Bolin Ding et al.ICML 2020 · 1,910 citations
- Beyond Homophily in Graph Neural Networks: Current Limitations and Effective DesignsJiong Zhu, Yujun Yan, Lingxiao Zhao, Mark Heimann et al.NeurIPS 2020 · 1,490 citations
- Geom-GCN: Geometric Graph Convolutional NetworksHongbin Pei, Bingzhe Wei, Kevin Chen-Chuan Chang, Yu Lei et al.ICLR 2020 · 1,445 citations
- Beyond Low-frequency Information in Graph Convolutional NetworksDeyu Bo, Xiao Wang, Chuan Shi, Huawei ShenAAAI 2021 · 773 citations
Related papers
- Beyond Homophily: Reconstructing Structure for Graph-agnostic ClusteringErlin Pan, Zhao KangICML 2023 · 67 citations
- Dual-Optimized Adaptive Graph Reconstruction for Multi-View Graph ClusteringZichen Wen, Tianyi Wu, Yazhou Ren, Yawen Ling et al.ACM MM 2024 · 7 citations
- Heterogeneous Graph Neural Network via Attribute CompletionDi Jin, Cuiying Huo, Chundong Liang, Liang YangWWW 2021 · 220 citations
- Homophily-Related: Adaptive Hybrid Graph Filter for Multi-View Graph ClusteringZichen Wen, Yawen Ling, Yazhou Ren, Tianyi Wu et al.AAAI 2024 · 24 citations
- Adaptive Local Clustering Over Attributed GraphsHaoran Zheng, Renchi Yang, Jianliang XuICDE 2025 · 2 citations
