Pre-Training Graph Contrastive Masked Autoencoders are Strong Distillers for EEG
Xinxu Wei, Kanhao Zhao, Yong Jiao, Hua Xie, Lifang He, Yu Zhang
Abstract
Effectively utilizing extensive unlabeled highdensity EEG data to improve performance in scenarios with limited labeled low-density EEG data presents a significant challenge. In this paper, we address this challenge by formulating it as a graph transfer learning and knowledge distillation problem. We propose a Unified Pre-trained Graph Contrastive Masked Autoencoder Distiller, named EEG-DisGCMAE, to bridge the gap between unlabeled and labeled as well as high-and low-density EEG data. Our approach introduces a novel unified graph self-supervised pre-training paradigm, which seamlessly integrates the graph contrastive pre-training with the graph masked autoencoder pre-training. Furthermore, we propose a graph topology distillation loss function, allowing a lightweight student model trained on low-density data to learn from a teacher model trained on high-density data during pre-training and fine-tuning. This method effectively handles missing electrodes through contrastive distillation. We validate the effectiveness of EEG-DisGCMAE across four classification tasks using two clinical EEG datasets with abundant data. The source code is available at https://github.com/ weixinxu666/EEG_DisGCMAE . Introduction Electroencephalography (EEG) is a pivotal tool for elucidating neural dysfunctions, making it indispensable for the
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Install the CLIlune papers fulltext 0a0447f0-5bd2-4ec6-b79f-de0e06acb296Cited by top-tier papers3
- A Brain Graph Foundation Model: Pre-Training and Prompt-Tuning across Broad Atlases and DisordersXinxu Wei, kanhao zhao, Yong Jiao, Lifang He et al.ICLR 2026 · 6 citations
- BraSTORM: A Dual-Branch Self-Supervised Framework for EEG Representation Learning via Input-Level Spatio-Temporal DecompositionYifan Wang, Der-Horng Lee, Bruce X. B. YuAAAI 2026
- KAST-BAR: Knowledge-Anchored Semantically-Dynamic Topology Brain Autoregressive Modeling for Universal Neural InterpretationHaoning Wang, Wenchao Yang, Shuai Shen, Yang LiICML 2026
Builds on10
- Graph Contrastive Learning with AugmentationsYuning You, Tianlong Chen, Yongduo Sui, Ting Chen et al.NeurIPS 2020 · 3,042 citations
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- GraphMAE: Self-Supervised Masked Graph AutoencodersZhenyu Hou, Xiao Liu, Yukuo Cen, Yuxiao Dong et al.KDD 2022 · 533 citations
- GPT-GNN: Generative Pre-Training of Graph Neural NetworksZiniu Hu, Yuxiao Dong, Kuansan Wang, Kai-Wei Chang et al.KDD 2020 · 438 citations
- Large Brain Model for Learning Generic Representations with Tremendous EEG Data in BCIWei-Bang Jiang, Li-Ming Zhao, Bao-Liang LuICLR 2024 · 298 citations
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