ADT-FSE: A New Encoder for SZ

SZ is a lossy floating-point data compressor that excels in compression ratio and throughput for high-performance computing (HPC), time series databases, and deep learning applications. However, SZ performs poorly for small chunks and has slow decompression. We pinpoint the Huffman tree in the quantization factor encoder as the bottleneck of SZ. In this paper, we propose ADT-FSE, a new quantization factor encoder for SZ. Based on the Gaussian distribution of quantization factors, we design an adaptive data transcoding (ADT) scheme to map quantization factors to codes for better compressibility, and then use finite state entropy (FSE) to compress the codes. Experiments show that ADT-FSE improves the quantization factor compression ratio, compression and decompression throughput by up to 5×, 2× and 8×, respectively, over the original SZ Huffman encoder. On average, SZ_ADT is over 2× faster than ZFP in decompression. Case studies of the TDengine time series database and HDF5 file store confirm that SZ_ADT significantly boosts user-perceived application performance. In addition, ADT-FSE makes the compression ratio prediction of SZ_ADT easy and accurate, and has the potential to dramatically reduce the area size of SZ hardware implementation.