A case for reframing automated medical image classification as segmentation
Sarah M. Hooper, Mayee F. Chen, Khaled Saab, Kush Bhatia, Curtis P. Langlotz, Christopher Ré
Abstract
Image classification and segmentation are common applications of deep learning to radiology. While many tasks can be framed using either classification or segmentation, classification has historically been cheaper to label and more widely used. However, recent work has drastically reduced the cost of training segmentation networks. In light of this recent work, we reexamine the choice of training classification vs. segmentation models. First, we use an information theoretic approach to analyze why segmentation vs. classification models may achieve different performances on the same dataset and task. We then implement methods for using segmentation models to classify medical images, which we call segmentation-for-classification, and compare these methods against traditional classification on three retrospective datasets (n=2, [18] [19] 237). We use our analysis and experiments to summarize the benefits of using segmentation-for-classification, including: improved sample efficiency, enabling improved performance with fewer labeled images (up to an order of magnitude lower), on low-prevalence classes, and on certain rare subgroups (up to 161.1% improved recall); improved robustness to spurious correlations (up to 44.8% improved robust AUROC); and improved model interpretability, evaluation, and error analysis. Recent work in label-efficient training enables us to reexamine this paradigm. Self-supervised learning, in-context learning, weakly-supervised learning, and semi-supervised learning can substantially reduce labeling burden [4, 5, 6, 7, 8, 9, 10] . Additionally, more public datasets and broad-use pre-37th Conference on Neural Information Processing Systems (NeurIPS 2023).
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