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Improved Expressivity of Hypergraph Neural Networks through High-Dimensional Generalized Weisfeiler-Leman Algorithms

Detian Zhang, Chengqiang Zhang, Yanghui Rao, Li Qing, Chunjiang Zhu

2025Year

Abstract

The isomorphism problem is a key challenge in both graph and hypergraph domains, crucial for applications like protein design, chemical pathways, and community detection. Hypergraph isomorphism, which models high-order relationships in real-world scenarios, remains underexplored compared to the graph isomorphism. Current algorithms for hypergraphs, like the 1-dimensional generalized Weisfeiler-Lehman test (1-GWL), lag behind advancements in graph isomorphism tests, limiting most hypergraph neural networks to 1-GWL's expressive power. To address this, we propose the high-dimensional GWL (k-GWL), generalizing k-WL from graphs to hypergraphs. We prove that k-GWL reduces to k-WL for simple graphs, and thus develop a unified isomorphism method for both graphs and hypergraphs. We also successfully establish a clear and complete understanding of the GWL hierarchy of expressivity, showing that (k+1)-GWL is more expressive than k-GWL with illustrative examples. Based on k-GWL, we develop a hypergraph neural network model named k-HNN with improved expressive power of k-GWL, which achieves superior performance on real-world datasets, including a 6% accuracy improvement on the Steam-Player dataset over the runner-up. Our code is available at https://github.com/talence-zcq/ KGWL .

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