CPath-Omni: A Unified Multimodal Foundation Model for Patch and Whole Slide Image Analysis in Computational Pathology
Yuxuan Sun, Yixuan Si, Chenglu Zhu, Xuan Gong, Kai Zhang, Pingyi Chen, Ye Zhang, Zhongyi Shui, Tao Lin, Lin Yang
Abstract
The emergence of large multimodal models (LMMs) has brought significant advancements to pathology. Previous research has primarily focused on separately training patch-level and whole-slide image (WSI)-level models, limiting the integration of learned knowledge across patches and WSIs, and resulting in redundant models. In this work, we introduce CPath-Omni, the first 15-billion-parameter LMM designed to unify both patch and WSI level image analysis, consolidating a variety of tasks at both levels, including classification, visual question answering, captioning, and visual referring prompting. Extensive experiments demonstrate that CPath-Omni achieves state-of-theart (SOTA) performance across seven diverse tasks on 39 out of 42 datasets, outperforming or matching task-specific models trained for individual tasks. Additionally, we develop a specialized pathology CLIP-based visual processor for CPath-Omni, CPath-CLIP, which, for the first time, integrates different vision models and incorporates a large language model as a text encoder to build a more powerful CLIP model, which achieves SOTA performance on nine zero-shot and four few-shot datasets. Our findings highlight CPath-Omni's ability to unify diverse pathology tasks, demonstrating its potential to streamline and advance the field of foundation model in pathology.
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Install the CLIlune papers fulltext dc20bcb6-1510-4d77-aaed-835f2fb7928aCited by top-tier papers7
- CPathAgent: An Agent-based Foundation Model for Interpretable High-Resolution Pathology Image Analysis Mimicking Pathologists' Diagnostic LogicYuxuan Sun, Yixuan Si, Chenglu Zhu, Kai Zhang et al.NeurIPS 2025 · 30 citations
- Patho-R1: A Multimodal Reinforcement Learning-Based Pathology Expert ReasonerWenchuan Zhang, Penghao Zhang, Jingru Guo, Tao Cheng et al.AAAI 2026 · 17 citations
- Beyond Pixel Simulation: Pathology Image Generation via Diagnostic Semantic Tokens and Prototype ControlMinghao Han, Yichen Liu, Yizhou Liu, Zizhi Chen et al.CVPR 2026 · 5 citations
- MLLM-HWSI: A Multimodal Large Language Model for Hierarchical Whole Slide Image UnderstandingBasit Alawode, Arif Mahmood, Muaz Radi, Shahad Albastaki et al.CVPR 2026 · 3 citations
- Act Like a Pathologist: Tissue-Aware Whole Slide Image ReasoningWentao Huang, Weimin Lyu, Peiliang Lou, Qingqiao Hu et al.CVPR 2026 · 3 citations
Builds on13
- Learning Transferable Visual Models From Natural Language SupervisionAlec Radford, Jong Wook Kim, Chris Hallacy, Aditya Ramesh et al.ICML 2021 · 47,906 citations
- Emerging Properties in Self-Supervised Vision TransformersMathilde Caron, Hugo Touvron, Ishan Misra, Hervé Jégou et al.ICCV 2021 · 8,921 citations
- InstructBLIP: Towards General-purpose Vision-Language Models with Instruction TuningWenliang Dai, Junnan Li, Dongxu Li, Anthony Meng Huat Tiong et al.NeurIPS 2023 · 4,013 citations
- Scaling Vision Transformers to Gigapixel Images via Hierarchical Self-Supervised LearningRichard J. Chen, Chengkuan Chen, Yicong Li, Tiffany Y. Chen et al.CVPR 2022 · 490 citations
- CAMEL: A Weakly Supervised Learning Framework for Histopathology Image SegmentationGang Xu, Zhigang Song, Zhuo Sun, Calvin Ku et al.ICCV 2019 · 187 citations
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