GraphMineSuite: Enabling High-Performance and Programmable Graph Mining Algorithms with Set Algebra
Maciej Besta, Zur Vonarburg-Shmaria, Yannick Schaffner, Leonardo Schwarz, Grzegorz Kwasniewski, Lukas Gianinazzi, Jakub Beránek, Kacper Janda, Tobias Holenstein, Sebastian Leisinger, Peter Tatkowski, Esref Özdemir
Abstract
We propose GraphMineSuite (GMS): the first benchmarking suite for graph mining that facilitates evaluating and constructing highperformance graph mining algorithms. First, GMS comes with a benchmark specification based on extensive literature review, prescribing representative problems, algorithms, and datasets. Second, GMS offers a carefully designed software platform for seamless testing of different fine-grained elements of graph mining algorithms, such as graph representations or algorithm subroutines. The platform includes parallel implementations of more than 40 considered baselines, and it facilitates developing complex and fast mining algorithms. High modularity is possible by harnessing set algebra operations such as set intersection and difference, which enables breaking complex graph mining algorithms into simple building blocks that can be separately experimented with. GMS is supported with a broad concurrency analysis for portability in performance insights, and a novel performance metric to assess the throughput of graph mining algorithms, enabling more insightful evaluation. As use cases, we harness GMS to rapidly redesign and accelerate state-of-the-art baselines of core graph mining problems: degeneracy reordering (by up to >2×), maximal clique listing (by up to >9×), 𝑘-clique listing (by 1.1×), and subgraph isomorphism (by up to 2.5×), also obtaining better theoretical performance bounds.
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Install the CLIlune papers fulltext abd0a4fc-93e8-45cf-805c-0cb9e021dd18Cited by top-tier papers10
- Graph of Thoughts: Solving Elaborate Problems with Large Language ModelsMaciej Besta, Nils Blach, Ales Kubicek, Robert Gerstenberger et al.AAAI 2024 · 1,292 citations
- SISA: Set-Centric Instruction Set Architecture for Graph Mining on Processing-in-Memory SystemsMaciej Besta, Raghavendra Kanakagiri, Grzegorz Kwasniewski, Rachata Ausavarungnirun et al.MICRO 2021 · 78 citations
- Motif Prediction with Graph Neural NetworksMaciej Besta, Raphael Grob, Cesare Miglioli, Nicola Bernold et al.KDD 2022 · 35 citations
- High Performance Unstructured SpMM Computation Using Tensor CoresPatrik Okanovic, Grzegorz Kwasniewski, Paolo Sylos Labini, Maciej Besta et al.SC 2024 · 15 citations
- A High-Performance Design, Implementation, Deployment, and Evaluation of The Slim Fly NetworkNils Blach, Maciej Besta, Daniele De Sensi, Jens Domke et al.NSDI 2024 · 13 citations
Builds on5
- Peregrine: a pattern-aware graph mining systemKasra Jamshidi, Rakesh Mahadasa, Keval VoraEuroSys 2020 · 107 citations
- Pangolin: An Efficient and Flexible Graph Mining System on CPU and GPUXuhao Chen, Roshan Dathathri, Gurbinder Gill, Keshav PingaliVLDB 2020 · 81 citations
- A Locality-Aware Energy-Efficient Accelerator for Graph Mining ApplicationsPengcheng Yao, Long Zheng, Zhen Zeng, Yu Huang et al.MICRO 2020 · 43 citations
- FatPaths: routing in supercomputers and data centers when shortest paths fall shortMaciej Besta, Marcel Schneider, Marek Konieczny, Karolina Cynk et al.SC 2020 · 25 citations
- High-performance parallel graph coloring with strong guarantees on work, depth, and qualityMaciej Besta, Armon Carigiet, Kacper Janda, Zur Vonarburg-Shmaria et al.SC 2020 · 20 citations
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