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Scalable All-pairs Shortest Paths for Huge Graphs on Multi-GPU Clusters

Piyush Sao, Hao Lu, Ramakrishnan Kannan, Vijay Thakkar, Richard W. Vuduc, Thomas E. Potok

2021Year
6Citations

Abstract

We present an optimized Floyd-Warshall (Floyd-Warshall) algorithm that computes the All-pairs shortest path (Apsp) for GPU accelerated clusters. The Floyd-Warshall algorithm due to its structural similarities to matrix-multiplication is well suited for highly parallel GPU architectures. To achieve high parallel efficiency, we address two key algorithmic challenges: reducing high communication overhead and addressing limited GPU memory. To reduce high communication costs, we redesign the parallel Floyd-Warshall (a) to expose more parallelism, (b) aggressively overlap communication and computation with pipelined and asynchronous scheduling of operations, and (c) tailored MPI-collective. To cope with limited GPU memory, we employ an offload model, where the data resides on the host and is transferred to GPU on-demand. The proposed optimizations are supported with detailed performance models for tuning. Our optimized parallel Floyd-Warshall implementation is up to 5× faster than a strong baseline and achieves 8.1 PetaFLOPS/sec on 256 nodes of the Summit supercomputer at Oak Ridge National Laboratory. This performance represents 70% of the theoretical peak and 80% parallel efficiency. The offload algorithm can handle 2.5× larger graphs with a 20% increase in overall running time.

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