Unsupervised Graph Clustering with Deep Structural Entropy
Jingyun Zhang, Hao Peng, Li Sun, Guanlin Wu, Chunyang Liu, Zhengtao Yu
Abstract
Research on Graph Structure Learning (GSL) provides key insights for graph-based clustering, yet current methods like Graph Neural Networks (GNNs), Graph Attention Networks (GATs), and contrastive learning often rely heavily on the original graph structure. Their performance deteriorates when the original graph's adjacency matrix is too sparse or contains noisy edges unrelated to clustering. Moreover, these methods depend on learning node embeddings and using traditional techniques like k-means to form clusters, which may not fully capture the underlying graph structure between nodes. To address these limitations, this paper introduces DeSE, a novel unsupervised graph clustering framework incorporating Deep Structural Entropy. It enhances the original graph with quantified structural information and deep neural networks to form clusters. Specifically, we first propose a method for calculating structural entropy with soft assignment, which quantifies structure in a differentiable form. Next, we design a Structural Learning layer (SLL) to generate an attributed graph from the original feature data, serving as a target to enhance and optimize the original structural graph, thereby mitigating the issue of sparse connections between graph nodes. Finally, our clustering assignment method (ASS), based on GNNs, learns node embeddings and a soft assignment matrix to cluster on the enhanced graph. The ASS layer can be stacked to meet downstream task requirements, minimizing structural entropy for stable clustering and maximizing node consistency with edge-based cross-entropy loss. Extensive comparative experiments are conducted on four benchmark datasets against eight representative unsupervised graph clustering baselines, demonstrating the superiority of the DeSE in both effectiveness and interpretability.
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Install the CLIlune papers fulltext a0dffbaf-20de-4415-8e93-d2496e4ea19dCited by top-tier papers2
- Breaking Structural Isolation: Scalable Graph Clustering via Community-Aware Sampling and Structural EntropyJingyun Zhang, Hao Peng, Jianxin Li, Angsheng Li et al.VLDB 2026
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- NodeFormer: A Scalable Graph Structure Learning Transformer for Node ClassificationQitian Wu, Wentao Zhao, Zenan Li, David P. Wipf et al.NeurIPS 2022 · 472 citations
- Towards Unsupervised Deep Graph Structure LearningYixin Liu, Yu Zheng, Daokun Zhang, Hongxu Chen et al.WWW 2022 · 257 citations
- SLAPS: Self-Supervision Improves Structure Learning for Graph Neural NetworksBahare Fatemi, Layla El Asri, Seyed Mehran KazemiNeurIPS 2021 · 220 citations
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