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On the parallel I/O optimality of linear algebra kernels: near-optimal matrix factorizations

Grzegorz Kwasniewski, Marko Kabic, Tal Ben-Nun, Alexandros Nikolaos Ziogas, Jens Eirik Saethre, André Gaillard, Timo Schneider, Maciej Besta, Anton Kozhevnikov, Joost VandeVondele, Torsten Hoefler

2021Year
18Citations
5Top-tier citations

Abstract

Matrix factorizations are among the most important building blocks of scientific computing. However, state-of-the-art libraries are not communication-optimal, underutilizing current parallel architectures. We present novel algorithms for Cholesky and LU factorizations that utilize an asymptotically communication-optimal 2.5D decomposition. We first establish a theoretical framework for deriving parallel I/O lower bounds for linear algebra kernels, and then utilize its insights to derive Cholesky and LU schedules, both communicating N3/(PM)N^{3}/(P\sqrt{M}) elements per processor, where M is the local memory size. The empirical results match our theoretical analysis: our implementations communicate significantly less than Intel MKL, SLATE, and the asymptotically communication-optimal CANDMC and CAPITAL libraries. Our code outperforms these state-of-the-art libraries in almost all tested scenarios, with matrix sizes ranging from 2,048 to 524,288 on up to 512 CPU nodes of the Piz Daint supercomputer, decreasing the time-to-solution by up to three times. Our code is ScaLAPAck-compatible and available as an open-source library.

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