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BIT-LLM: Brain Instruction Tuned LLM with persistent Cross-Attention for fMRI-to-Text Decoding

Sunghwan LEE, jihun kim, Chaelynn Kim, Jiyun Park, Jong-Hwan Lee

2026Year

Abstract

Decoding fMRI into natural language is challenging because strong, pre-trained language priors can dominate autoregressive generation, obscuring whether a model truly utilizes neural evidence. We introduce Brain Instruction Tuned LLM (BIT-LLM), which exposes fMRI-derived tokens as a persistent key-value memory through interleaved cross-attention adapters, enabling repeated neural access throughout decoding. BIT-LLM is trained with a three-stage pipeline: (i) multimodal contrastive learning to obtain semantically aligned fMRI representations, (ii) supervised fine-tuning to learn the brain-LLM interface while freezing the encoder and backbone LLM, and (iii) rewardbased finetuning to optimize sequence-level caption quality directly. On the NSD subject-heldout (S1-7 train, S8 test), BIT-LLM yields substantially improved captioning quality over prior baselines under greedy decoding. In addition to standard captioning metrics, we perform several complementary evaluations to assess the robustness of brain-language grounding. Specifically, we conduct perturbation-based sanity checks by zeroing fMRI inputs or shuffling voxel values, and examine whether internal representations and generated outputs change accordingly. BIT-LLM exhibits clear sensitivity to these perturbations, indicating effective utilization of voxel values and their spatial correspondence.

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