Incomplete Multi-modal Brain Tumor Segmentation via Learnable Sorting State Space Model
Zheyu Zhang, Yayuan Lu, Feipeng Ma, Yueyi Zhang, Huanjing Yue, Xiaoyan Sun
Abstract
Brain tumor segmentation plays a crucial role in clinical diagnosis, yet the frequent unavailability of certain MRI modalities poses a significant challenge. In this paper, we introduce the Learnable Sorting State Space Model (LS3M), a novel framework designed to maximize the utilization of available modalities for brain tumor segmentation. LS3M excels at efficiently modeling long-range dependencies based on the Mamba design, while incorporating differentiable permutation matrices that reorder input sequences based on modality-specific characteristics. This dynamic reordering ensures that critical spatial inductive biases and long-range semantic correlations inherent in 3D brain MRI are preserved, which is crucial for imcomplete multi-modal brain tumor segmentation. Once the input sequences are reordered using the generated permutation matrix, the Series State Space Model (S3M) block models the relationships between them, capturing both local and longrange dependencies. This enables effective representation of intra-modal and inter-modal relationships, significantly improving segmentation accuracy. Extensive experiments on the BraTS2018 and BraTS2020 datasets demonstrate that LS3M outperforms existing methods, offering a robust solution for brain tumor segmentation, particularly in scenarios with missing modalities.
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Cited by top-tier papers4
- OmniBrainBench: A Comprehensive Multimodal Benchmark for Brain Imaging Analysis Across Multi-stage Clinical TasksZhihao Peng, Cheng Wang, Shengyuan Liu, Zhiying Liang et al.CVPR 2026 · 7 citations
- Virtual Nodes Guided Dynamic Graph Neural Network for Brain Tumor Segmentation with Missing ModalitiesSha Tao, Jiao Pan, Yu Guo, Chao YaoCVPR 2026
- Plug, Play, and Fortify: A Low-Cost Module for Robust Multimodal Image Understanding ModelsSiqi Lu, Wanying Xu, Yongbin Zheng, Wenting Luan et al.ICLR 2026
- Uni-Encoder Meets Multi-Encoders: Representation Before Fusion for Brain Tumor Segmentation with Missing ModalitiesPeibo Song, Xiaotian Xue, Jinshuo Zhang, Zihao Wang et al.CVPR 2026
Builds on19
- Efficiently Modeling Long Sequences with Structured State SpacesAlbert Gu, Karan Goel, Christopher RéICLR 2022 · 3,482 citations
- VMamba: Visual State Space ModelYue Liu, Yunjie Tian, Yuzhong Zhao, Hongtian Yu et al.NeurIPS 2024 · 3,199 citations
- Vision Mamba: Efficient Visual Representation Learning with Bidirectional State Space ModelLianghui Zhu, Bencheng Liao, Qian Zhang, Xinlong Wang et al.ICML 2024 · 1,725 citations
- Transformers are SSMs: Generalized Models and Efficient Algorithms Through Structured State Space DualityTri Dao, Albert GuICML 2024 · 1,407 citations
- PointMamba: A Simple State Space Model for Point Cloud AnalysisDingkang Liang, Xin Zhou, Wei Xu, Xingkui Zhu et al.NeurIPS 2024 · 380 citations
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