Thinking in Scales: Accelerating Gigapixel Pathology Image Analysis via Adaptive Continuous Reasoning
Jiusong Ge, Yingkang Zhan, Wenjie Zhao, Di Zhang, Ke Wang, Jiashuai Liu, Chunze Yang, Chengzu Li, Jian Zhang, Yuxin Dong, Ni Zhang, Qidong Liu
Abstract
Traditional whole slide image (WSI) analysis methods typically rely on the multiple instance learning (MIL) paradigm, which extracts patch-level features at high magnification and aggregates them for slide-level prediction. However, such exhaustive patch-level processing is computationally expensive, severely limiting the efficiency and scalability of WSI analysis. To address this challenge, we propose PathCTM (a Pathology-oriented Continuous Thought Model) that enables token-efficient scale-space continuous reasoning for gigapixel WSIs. PathCTM formulates diagnostic inference as a dynamic sequential information pursuit. It progressively transitions from low-magnification global to high-magnification local inspection, and adaptively terminates inference when sufficient evidence is gathered to effectively bound decision uncertainty. Specifically, it uses conditional computation for dynamic scale switching with attention-guided region pruning, coupled with confidence-aware early stopping. Extensive experiments demonstrate that, compared with standard MIL-based methods, PathCTM reduces the number of required image patches by 95.95% and shortens inference time by approximately 95.62%, while maintaining AUC without degradation. Code is available at https://github.com/JSGe-AI/PathCTM.
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Builds on9
- TransMIL: Transformer based Correlated Multiple Instance Learning for Whole Slide Image ClassificationZhuchen Shao, Hao Bian, Yang Chen, Yifeng Wang et al.NeurIPS 2021 · 1,163 citations
- Scaling Vision Transformers to Gigapixel Images via Hierarchical Self-Supervised LearningRichard J. Chen, Chengkuan Chen, Yicong Li, Tiffany Y. Chen et al.CVPR 2022 · 490 citations
- Liquid Time-constant NetworksRamin M. Hasani, Mathias Lechner, Alexander Amini, Daniela Rus et al.AAAI 2021 · 399 citations
- Feature Re-Embedding: Towards Foundation Model-Level Performance in Computational PathologyWenhao Tang, Fengtao Zhou, Sheng Huang, Xiang Zhu et al.CVPR 2024 · 70 citations
- Continuous Thought MachinesLuke Darlow, Ciaran Regan, Sebastian Risi, Jeffrey Seely et al.NeurIPS 2025 · 22 citations
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