Learning Distances from Data with Normalizing Flows and Score Matching

Density-based distances (DBDs) offer an elegant solution to the problem of metric learning. By defining a Riemannian metric which increases with decreasing probability density, shortest paths naturally follow the data manifold and points are clustered according to the modes of the data. We show that existing methods to estimate Fermat distances, a particular choice of DBD, suffer from poor convergence in both low and high dimensions due to i) inaccurate density estimates and ii) reliance on graph-based paths which are increasingly rough in high dimensions. To address these issues, we propose learning the densities using a normalizing flow, a generative model with tractable density estimation, and employing a smooth relaxation method using a score model initialized from a graph-based proposal. Additionally, we introduce a dimension-adapted Fermat distance that exhibits more intuitive behavior when scaled to high dimensions and offers better numerical properties. Our work paves the way for practical use of density-based distances, especially in high-dimensional spaces.