Wyckoff Transformer: Generation of Symmetric Crystals
Nikita Kazeev, Wei Nong, Ignat Romanov, Ruiming Zhu, Andrey E. Ustyuzhanin, Shuya Yamazaki, Kedar Hippalgaonkar
Abstract
Symmetry rules that atoms obey when they bond together to form an ordered crystal play a fundamental role in determining their physical, chemical, and electronic properties such as electrical and thermal conductivity, optical and polarization behavior, and mechanical strength. Almost all known crystalline materials have internal symmetry. Consistently generating stable crystal structures is still an open challenge, specifically because such symmetry rules are not accounted for. To address this issue, we propose WyFormer, a generative model for materials conditioned on space group symmetry. We use Wyckoff positions as the basis for an elegant, compressed, and discrete structure representation. To model the distribution, we develop a permutation-invariant autoregressive model based on the Transformer and an absence of positional encoding. WyFormer has a unique and powerful synergy of attributes, proven by extensive experimentation: best-inclass symmetry-conditioned generation, physicsmotivated inductive bias, competitive stability of the generated structures, competitive material property prediction quality, and unparalleled inference speed.
Ask about this paper
Your agent reads all of it.
Lune indexed this paper to the last equation, along with the top-tier papers that cite it. Ask a question and the answer quotes them.
Your agent calls
Luneget_paper_fulltext
Free to start. No credit card required.
Terminal
Install the CLIlune papers fulltext 044a9cfa-d916-4de3-b597-0554888755b8Cited by top-tier papers5
- Space Group Equivariant Crystal DiffusionRees Chang, Angela Pak, Alex Guerra, Ni Zhan et al.NeurIPS 2025 · 20 citations
- PLaID++: A Preference Aligned Language Model for Targeted Inorganic Materials DesignAndy Xu, Rohan Desai, Larry Wang, Ethan Ritz et al.ICML 2026 · 11 citations
- Local-Global Associative Frames for Symmetry-Preserving Crystal Structure ModelingHaowei Hua, Wanyu LinNeurIPS 2025 · 3 citations
- Multimodal Crystal Flow: Any-to-Any Modality Generation for Unified Crystal ModelingKiyoung Seong, Sungsoo Ahn, Sehui Han, Changyoung ParkICML 2026
- CrystalDiT: Simple Diffusion Transformers for Crystal GenerationXiaohan Yi, Guikun Xu, Zhong Zhang, Liu Liu et al.AAAI 2026
Builds on7
- Crystal Diffusion Variational Autoencoder for Periodic Material GenerationTian Xie, Xiang Fu, Octavian-Eugen Ganea, Regina Barzilay et al.ICLR 2022 · 394 citations
- Crystal Structure Prediction by Joint Equivariant DiffusionRui Jiao, Wenbing Huang, Peijia Lin, Jiaqi Han et al.NeurIPS 2023 · 245 citations
- Fine-Tuned Language Models Generate Stable Inorganic Materials as TextNate Gruver, Anuroop Sriram, Andrea Madotto, Andrew Gordon Wilson et al.ICLR 2024 · 120 citations
- Space Group Constrained Crystal GenerationRui Jiao, Wenbing Huang, Yu Liu, Deli Zhao et al.ICLR 2024 · 78 citations
- Scalable Diffusion for Materials GenerationSherry Yang, KwangHwan Cho, Amil Merchant, Pieter Abbeel et al.ICLR 2024 · 77 citations
Related papers
- WyckoffDiff - A Generative Diffusion Model for Crystal SymmetryFilip Ekström Kelvinius, Oskar B. Andersson, Abhijith S. Parackal, Dong Qian et al.ICML 2025
- Crystalformer: Infinitely Connected Attention for Periodic Structure EncodingTatsunori Taniai, Ryo Igarashi, Yuta Suzuki, Naoya Chiba et al.ICLR 2024 · 21 citations
- Periodic Graph Transformers for Crystal Material Property PredictionKeqiang Yan, Yi Liu, Yuchao Lin, Shuiwang JiNeurIPS 2022 · 167 citations
- Equivariant Networks for Crystal StructuresSékou-Oumar Kaba, Siamak RavanbakhshNeurIPS 2022 · 38 citations
- Conformal Crystal Graph Transformer with Robust Encoding of Periodic InvarianceYingheng Wang, Shufeng Kong, John M. Gregoire, Carla P. GomesAAAI 2024 · 9 citations
